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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs35667562 chr10:950630 G/A 0.000185 396 15.18 15.72 13.3 KM Plot
LGG rs35749721 chr1:161698687 AT/A 1.01E-5 399 14.83 19.03 13.97 KM Plot
LGG rs35761380 chr3:38876049 T/A 1.55E-5 400 15.17 16.42 11.63 KM Plot
LGG rs35968821 chr10:910225 A/G 4.8E-6 407 15.02 17.73 10.57 KM Plot
LGG rs36041113 chr5:94040554 AT/A 3.01E-5 405 14.78 17.63 9.8 KM Plot
LGG rs36051896 chr10:1155747 T/C 2.5E-8 399 16.23 14.8 8.43 KM Plot
LGG rs360527 chr20:12991110 A/G 6.03E-5 406 15.17 15.55 17.07 KM Plot
LGG rs360529 chr20:12990364 A/G 5.8E-5 407 15.18 15.55 17.07 KM Plot
LGG rs360530 chr20:12990265 C/T 5.8E-5 407 15.18 15.55 17.07 KM Plot
LGG rs360532 chr20:12988904 C/T 5.8E-5 407 15.18 15.55 17.07 KM Plot
LGG rs360536 chr20:12987644 C/T 5.82E-5 406 15.2 15.55 17.07 KM Plot
LGG rs361720 chr22:18902729 C/T 0.000198 396 10.5 16.45 15.17 KM Plot
LGG rs362229 chr22:18902700 A/G 0.000192 398 10.5 16.45 15.17 KM Plot
LGG rs365187 chr5:155986686 G/C 5.15E-6 406 15.45 15.17 15.37 KM Plot
LGG rs366643 chr5:156031885 A/G 4.58E-5 407 16.73 14.12 10.53 KM Plot